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RegexRawCitationNlm30CitationSchemaFilter Class Reference
Inheritance diagram for RegexRawCitationNlm30CitationSchemaFilter:
Nlm30CitationSchemaFilter PersistableFilter Filter DataObject

Public Member Functions

 getClassName ()
process (&$input)
- Public Member Functions inherited from Nlm30CitationSchemaFilter
 _guessPublicationType (&$metadataArray)
_recursivelyTrimPunctuation (&$metadataArray)
callWebService ($url, &$params, $returnType=XSL_TRANSFORMER_DOCTYPE_DOM, $method= 'GET')
 constructSearchStrings (&$searchTemplates, &$citationDescription)
fixPublisherNameAndLocation (&$metadata)
 getIsOptional ()
getNlm30CitationDescriptionFromMetadataArray (&$metadataArray)
 getSupportedPublicationTypes ()
 Nlm30CitationSchemaFilter (&$filterGroup, $supportedPublicationTypes=array())
postProcessMetadataArray (&$preliminaryNlm30Array)
 supports (&$input, &$output)
transformWebServiceResults (&$xmlResult, $xslFileName)
- Public Member Functions inherited from PersistableFilter
 addSetting (&$setting)
 getClassName ()
getFilterGroup ()
 getInternalSettings ()
 getIsTemplate ()
 getLocalizedSettingNames ()
 getParentFilterId ()
getSetting ($settingName)
 getSettingNames ()
getSettings ()
 hasSetting ($settingName)
 hasSettings ()
 PersistableFilter ($filterGroup)
 setIsTemplate ($isTemplate)
 setParentFilterId ($parentFilterId)
- Public Member Functions inherited from Filter
 addError ($message)
 clearErrors ()
execute (&$input)
 Filter ($inputType, $outputType)
 getDisplayName ()
 getErrors ()
getInputType ()
getLastInput ()
getLastOutput ()
getOutputType ()
getRuntimeEnvironment ()
 getSeq ()
 hasErrors ()
 isCompatibleWithRuntimeEnvironment ()
process (&$input)
 setDisplayName ($displayName)
 setRuntimeEnvironment (&$runtimeEnvironment)
 setSeq ($seq)
 setTransformationType (&$inputType, &$outputType)
 supports (&$input, &$output)
 supportsAsInput (&$input)
- Public Member Functions inherited from DataObject
 addSupportedMetadataAdapter ($metadataAdapter)
 DataObject ()
 extractMetadata ($metadataSchema)
 getAdditionalMetadataFieldNames ()
getAllData ()
getData ($key, $locale=null)
 getHasLoadableAdapters ()
 getId ()
 getLocaleMetadataFieldNames ()
getLocalizedData ($key)
 getMetadataFieldNames ($translated=true)
 getSetMetadataFieldNames ($translated=true)
 getSupportedExtractionAdapters ()
 getSupportedInjectionAdapters ()
 getSupportedMetadataSchemas ()
 hasData ($key, $locale=null)
 injectMetadata ($metadataDescription)
 removeSupportedMetadataAdapter ($metadataSchemaName)
 setAllData (&$data)
 setData ($key, $value, $locale=null)
 setHasLoadableAdapters ($hasLoadableAdapters)
 setId ($id)
 upcastTo ($targetObject)

Additional Inherited Members

- Static Public Member Functions inherited from Nlm30CitationSchemaFilter
static _allowedPublicationTypes ()
- Static Public Member Functions inherited from PersistableFilter
static tempGroup ($inputType, $outputType)
- Static Public Member Functions inherited from Filter
static supportedRuntimeEnvironmentSettings ()
- Public Attributes inherited from PersistableFilter
 $_settings = array()
- Public Attributes inherited from Filter
 $_errors = array()
 $_runtimeEnvironment = false
- Public Attributes inherited from DataObject
 $_data = array()
 $_extractionAdaptersLoaded = false
 $_hasLoadableAdapters = false
 $_injectionAdaptersLoaded = false
 $_metadataExtractionAdapters = array()
 $_metadataInjectionAdapters = array()

Detailed Description

A simple regex based citation parsing filter. Uses regexes to break a citation string into metadata elements. Works best on ICMJE/Vancouver-type journal citations.

TODO: Rewrite this filter so that it becomes easy to extend with custom expressions.

Definition at line 27 of file

Member Function Documentation

RegexRawCitationNlm30CitationSchemaFilter::getClassName ( )

Return the fully qualified class name of the filter class. This information must be persisted when saving a filter so that the filter can later be reconstructed from the information in the database.

(This must be hard coded by sub-classes for PHP4 compatibility. PHP4 always returns class names lowercase which we cannot tolerate as we need this path to find the class on case sensitive file systems.)

Definition at line 44 of file

& RegexRawCitationNlm30CitationSchemaFilter::process ( $input)

This method performs the actual data processing. NB: sub-classes must implement this method.

$inputmixed validated filter input data
mixed non-validated filter output or null if processing was not successful.

Definition at line 57 of file

References Nlm30CitationSchemaFilter\getNlm30CitationDescriptionFromMetadataArray(), Nlm30CitationSchemaFilter\postProcessMetadataArray(), String\regexp_match_get(), String\regexp_replace(), and String\trimPunctuation().

The documentation for this class was generated from the following file: